12/18/08: Here are some of the raw files for the next version. There are still some problems and old tags, and everything is subject to change of course, but things have settled down a little bit at least. Reactions haven't been tested out yet, so I haven't included them. The dwarf is currently the only updated creature. Some of the files have notes explaining the new commands.
Bodies
Body Detail Plans
Material Templates
Tissue Templates
Color Patterns for Eyes
Dwarf
Layer Rocks
Soil Types
Minerals
Gems
Metals
Plants (including trees)